Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRA2ATransformer 2 alpha homolog. (281 aa)    
Predicted Functional Partners:
TRA2B
Transformer 2 beta homolog.
   
  0.999
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.996
SRSF10
Serine and arginine rich splicing factor 10.
   
 0.995
SRSF7
Serine and arginine rich splicing factor 7.
   
 0.994
ENSCWAP00000010327
annotation not available
   
 0.993
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.986
SRSF2
Serine and arginine rich splicing factor 2.
  
0.986
SRSF4
Serine and arginine rich splicing factor 4.
   
 0.981
SRSF6
Serine and arginine rich splicing factor 6.
   
 0.977
SRSF5
Serine and arginine rich splicing factor 5.
   
 0.970
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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