STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRA2ATransformer 2 alpha homolog. (281 aa)    
Predicted Functional Partners:
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.988
ENSCWAP00000010327
annotation not available
   
 0.985
SRSF7
Serine and arginine rich splicing factor 7.
   
 0.980
SRSF10
Serine and arginine rich splicing factor 10.
   
0.969
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.967
SRSF4
Serine and arginine rich splicing factor 4.
   
0.965
TRA2B
Transformer 2 beta homolog.
  
 
0.958
SRSF6
Serine and arginine rich splicing factor 6.
  
0.937
SRSF2
Serine and arginine rich splicing factor 2.
  
0.935
SRSF11
Serine and arginine rich splicing factor 11.
   
 0.885
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.