STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP39Rho GTPase activating protein 39. (1113 aa)    
Predicted Functional Partners:
SYNGAP1
Synaptic Ras GTPase activating protein 1.
    
 
 0.805
CNKSR3
CNKSR family member 3.
   
 
 0.782
CDC42
Cell division cycle 42.
    
 0.765
CNKSR2
Connector enhancer of kinase suppressor of Ras 2.
   
 
 0.753
ROBO4
Roundabout guidance receptor 4.
    
 0.737
ROBO1
Roundabout guidance receptor 1.
    
 0.737
ROBO2
Roundabout guidance receptor 2.
    
 0.737
GOLGB1
Golgin B1.
    
 0.692
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.690
RHOG
Ras homolog family member G.
    
 0.676
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.