STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP39Rho GTPase activating protein 39. (1113 aa)    
Predicted Functional Partners:
GOLGB1
Golgin B1.
    
 0.852
TMEM35A
Transmembrane protein 35A.
      
 0.760
ENSCWAP00000011720
annotation not available
      
 0.743
ROBO1
Roundabout guidance receptor 1.
    
 0.722
ROBO2
Roundabout guidance receptor 2.
    
 0.722
CDC42
Cell division cycle 42.
    
 0.711
WDR18
WD repeat domain 18.
   
 0.696
NCF4
Neutrophil cytosolic factor 4.
    
 
 0.694
TEX10
Testis expressed 10.
    
 0.684
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.683
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.