STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CD53CD53 molecule. (219 aa)    
Predicted Functional Partners:
LAPTM5
Lysosomal protein transmembrane 5.
   
  
 0.931
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 0.855
CD48
CD48 molecule.
   
  
 0.852
ENSCWAP00000009760
annotation not available
   
  
 0.825
CD63
CD63 molecule.
   
 
 0.823
ITGB2
Integrin subunit beta 2.
   
 0.820
TSPAN3
Tetraspanin 3.
     
 0.805
LCP1
Lymphocyte cytosolic protein 1.
   
    0.803
LCP2
Lymphocyte cytosolic protein 2.
   
  
 0.794
EVI2B
Ecotropic viral integration site 2B.
   
  
 0.744
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.