STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001460annotation not available (60 aa)    
Predicted Functional Partners:
C8orf33
Chromosome 8 open reading frame 33.
      
 0.524
ODAM
Odontogenic, ameloblast associated.
      
 0.523
ZNF34
Zinc finger protein 34.
      
 0.489
NIM1K
NIM1 serine/threonine protein kinase.
      
 0.483
ENSCWAP00000015696
annotation not available
      
 0.483
SPIDR
Scaffold protein involved in DNA repair.
      
 0.472
TMEM160
Transmembrane protein 160.
      
 0.434
LRRC26
Leucine rich repeat containing 26.
      
 0.430
ZC3H4
Zinc finger CCCH-type containing 4.
      
 0.414
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.