STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF16Rho guanine nucleotide exchange factor 16. (699 aa)    
Predicted Functional Partners:
ECT2
Epithelial cell transforming 2.
     
0.830
AKAP13
A-kinase anchoring protein 13.
    
0.786
ENSCWAP00000016037
annotation not available
     
 0.782
FMNL3
Formin like 3.
      
 0.768
IQGAP2
IQ motif containing GTPase activating protein 2.
      
 0.760
ENSCWAP00000015290
annotation not available
    
0.759
MYO9B
Myosin IXB.
      
 0.756
ECT2L
Epithelial cell transforming 2 like.
     
 0.748
DOCK11
Dedicator of cytokinesis 11.
      
 0.726
ARHGEF6
Rac/Cdc42 guanine nucleotide exchange factor 6.
     
 0.709
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.