Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C8orf82Chromosome 8 open reading frame 82. (218 aa)    
Predicted Functional Partners:
ETFA
Electron transfer flavoprotein subunit alpha.
    
   0.948
ETFB
Electron transfer flavoprotein subunit beta.
   
   0.896
CELF1
CUGBP Elav-like family member 1.
      
 0.534
LRRC24
Leucine rich repeat containing 24.
      
 0.488
CYHR1
Cysteine and histidine rich 1.
   
  
 0.468
MAF1
MAF1 homolog, negative regulator of RNA polymerase III.
      
 0.466
LRRC14
Leucine rich repeat containing 14.
      
 0.460
MFSD3
Major facilitator superfamily domain containing 3.
      
 0.460
PPP1R16A
Protein phosphatase 1 regulatory subunit 16A.
   
  
 0.460
GRINA
Glutamate ionotropic receptor NMDA type subunit associated protein 1.
      
 0.455
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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