STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C8orf82Chromosome 8 open reading frame 82. (218 aa)    
Predicted Functional Partners:
ETFA
Electron transfer flavoprotein subunit alpha.
    
   0.682
LRRC24
Leucine rich repeat containing 24.
      
 0.594
CYHR1
Cysteine and histidine rich 1.
   
  
 0.567
MAF1
MAF1 homolog, negative regulator of RNA polymerase III.
      
 0.562
PPP1R16A
Protein phosphatase 1 regulatory subunit 16A.
   
  
 0.560
MFSD3
Major facilitator superfamily domain containing 3.
      
 0.558
GRINA
Glutamate ionotropic receptor NMDA type subunit associated protein 1.
      
 0.557
LRRC14
Leucine rich repeat containing 14.
      
 0.556
C8orf33
Chromosome 8 open reading frame 33.
      
 0.554
KIFC2
Kinesin family member C2.
      
 0.551
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.