STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITGB6Integrin subunit beta 6. (788 aa)    
Predicted Functional Partners:
ITGAV
Integrin subunit alpha V.
   
 0.999
ITGA5
Integrin subunit alpha 5.
   
 0.986
ITGA8
Integrin subunit alpha 8.
   
 0.985
ITGA2B
Integrin subunit alpha 2b.
   
 0.985
FLNB
Filamin B.
    
 0.975
ITGA3
Integrin subunit alpha 3.
   
 0.973
ITGA1
Integrin subunit alpha 1.
   
 0.971
TLN2
Talin 2.
   
 0.970
TLN1
Talin 1.
   
 0.970
ITGA4
Integrin subunit alpha 4.
   
 0.970
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.