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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP42Rho GTPase activating protein 42. (874 aa)    
Predicted Functional Partners:
PRSS56
Serine protease 56.
      
 0.858
MAIP1
Matrix AAA peptidase interacting protein 1.
      
 0.736
NEPRO
Nucleolus and neural progenitor protein.
      
 0.733
ASCL4
Achaete-scute family bHLH transcription factor 4.
      
 0.705
UVSSA
UV stimulated scaffold protein A.
      
 0.697
ATP6V1E2
ATPase H+ transporting V1 subunit E2.
      
 0.691
MEIOC
Meiosis specific with coiled-coil domain.
      
 0.689
ABCA12
ATP binding cassette subfamily A member 12.
      
 0.687
ENSCWAP00000000282
annotation not available
      
 0.676
CDC42
Cell division cycle 42.
    
 0.662
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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