Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP42Rho GTPase activating protein 42. (874 aa)    
Predicted Functional Partners:
DEF6
DEF6 guanine nucleotide exchange factor.
    
  0.835
ARHGAP10
Rho GTPase activating protein 10.
    
   0.782
CDC42EP2
CDC42 effector protein 2.
    
   0.765
PRSS56
Serine protease 56.
      
 0.754
CDC42
Cell division cycle 42.
    
 0.710
ENSCWAP00000005035
annotation not available
    
 0.680
RHOB
Ras homolog family member B.
    
 0.680
RHOA
Ras homolog family member A.
    
 0.680
NEPRO
Nucleolus and neural progenitor protein.
      
 0.638
MAIP1
Matrix AAA peptidase interacting protein 1.
      
 0.635
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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