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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001497annotation not available (125 aa)    
Predicted Functional Partners:
SPRED1
Sprouty related EVH1 domain containing 1.
    
 
 0.745
CLDN5
Claudin 5.
   
  
 0.722
ROBO4
Roundabout guidance receptor 4.
   
  
 0.721
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.715
KBTBD3
Kelch repeat and BTB domain containing 3.
    
 
 0.681
ZC3H12C
Zinc finger CCCH-type containing 12C.
      
 0.656
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.647
ARID4A
AT-rich interaction domain 4A.
    
 0.642
ARID4B
AT-rich interaction domain 4B.
    
 0.642
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.609
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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