Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001506annotation not available (901 aa)    
Predicted Functional Partners:
LTN1
Listerin E3 ubiquitin protein ligase 1.
      
 0.745
WRAP73
WD repeat containing, antisense to TP73.
    
 
 0.672
MATN2
Matrilin 2.
 
      0.636
HMGXB4
HMG-box containing 4.
      
 0.616
RITA1
RBPJ interacting and tubulin associated 1.
      
 0.614
ZBTB40
Zinc finger and BTB domain containing 40.
    
 
 0.606
CTNNAL1
Catenin alpha like 1.
    
 
 0.588
RHEBL1
RHEB like 1.
    
 
 0.584
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.583
MST1R
Macrophage stimulating 1 receptor.
    
 0.583
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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