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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGXT2Alanine--glyoxylate aminotransferase 2. (495 aa)    
Predicted Functional Partners:
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 0.980
UPB1
Beta-ureidopropionase 1.
  
 
 0.970
PCCA
propionyl-CoA carboxylase subunit alpha.
     
 0.964
HAO1
Hydroxyacid oxidase 1.
   
 
 0.951
GLDC
Glycine decarboxylase.
  
 
 0.948
ABAT
4-aminobutyrate aminotransferase.
   
0.945
HAO2
Hydroxyacid oxidase 2.
   
 
 0.944
PIPOX
Pipecolic acid and sarcosine oxidase.
  
 
 0.943
ALDH7A1
Aldehyde dehydrogenase 7 family member A1.
  
 0.941
ENSCWAP00000016285
annotation not available
 
 0.937
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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