STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MALSU1Mitochondrial assembly of ribosomal large subunit 1. (234 aa)    
Predicted Functional Partners:
RPL23
Ribosomal protein L23.
    
 
 0.991
ENSCWAP00000002777
annotation not available
   
 
 0.991
MRPL21
Mitochondrial ribosomal protein L21.
  
   0.987
MRPL17
Mitochondrial ribosomal protein L17.
  
   0.985
MRPL32
Mitochondrial ribosomal protein L32.
  
 
 0.984
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.984
MRPL20
Mitochondrial ribosomal protein L20.
   
 
 0.983
MRPL47
Mitochondrial ribosomal protein L47.
   
   0.980
MRPL43
Mitochondrial ribosomal protein L43.
   
   0.978
MRPL24
Mitochondrial ribosomal protein L24.
   
 
 0.976
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.