STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001522annotation not available (119 aa)    
Predicted Functional Partners:
PATE3
Prostate and testis expressed 3.
     
 0.941
PATE2
Prostate and testis expressed 2.
     
 0.933
ENSCWAP00000001538
annotation not available
     
 0.911
ENSCWAP00000001556
annotation not available
     
 0.911
LYPD6
LY6/PLAUR domain containing 6.
     
 0.851
LYPD6B
LY6/PLAUR domain containing 6B.
     
  0.851
LYNX1
Ly6/neurotoxin 1.
     
 0.832
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
     
  0.809
CHRNA10
Cholinergic receptor nicotinic alpha 10 subunit.
     
  0.809
CHRNE
Cholinergic receptor nicotinic epsilon subunit.
     
  0.809
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.