STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2AUbiquitin conjugating enzyme E2 A. (152 aa)    
Predicted Functional Partners:
ENSCWAP00000007138
annotation not available
   
 0.992
RNF40
Ring finger protein 40.
    
 0.989
RNF20
Ring finger protein 20.
    
 0.989
RAD18
RAD18 E3 ubiquitin protein ligase.
    
 0.989
UBB
Ubiquitin B.
   
 0.958
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.957
UBA1
Ubiquitin like modifier activating enzyme 1.
   
 0.949
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.922
UBA6
Ubiquitin like modifier activating enzyme 6.
   
 0.920
UBR1
Ubiquitin protein ligase E3 component n-recognin 1.
    
 0.913
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.