STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC14Leucine rich repeat containing 14. (493 aa)    
Predicted Functional Partners:
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
  0.953
CUL2
Cullin 2.
    
 
 0.943
COPS5
COP9 signalosome subunit 5.
    
   0.942
COPS3
COP9 signalosome subunit 3.
    
   0.931
COPS6
COP9 signalosome subunit 6.
    
   0.873
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
  0.865
WDR74
WD repeat domain 74.
      
 0.705
RTN4IP1
Reticulon 4 interacting protein 1.
     
 0.704
ALG12
ALG12 alpha-1,6-mannosyltransferase.
   
  
 0.686
PIK3IP1
Phosphoinositide-3-kinase interacting protein 1.
      
 0.675
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.