Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4DSemaphorin 4D. (863 aa)    
Predicted Functional Partners:
CD72
CD72 molecule.
    
 0.998
PLXNB1
Plexin B1.
    
 0.993
PLXNB3
Plexin B3.
    
 0.992
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 0.987
PLXNA2
Plexin A2.
    
 0.918
SEMA4B
Semaphorin 4B.
    
 0.912
PLXNA1
Plexin A1.
    
0.908
PLXNC1
Plexin C1.
    
0.901
PLXND1
Plexin D1.
    
 0.889
MET
MET proto-oncogene, receptor tyrosine kinase.
   
 0.885
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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