STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CACNA1SCalcium voltage-gated channel subunit alpha1 S. (1876 aa)    
Predicted Functional Partners:
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
   
 0.994
CACNB1
Calcium voltage-gated channel auxiliary subunit beta 1.
   
 0.987
CACNA2D1
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
   
 0.987
CACNB2
Calcium voltage-gated channel auxiliary subunit beta 2.
   
 0.976
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
    
 0.974
PRKACA
Protein kinase cAMP-activated catalytic subunit alpha.
    
 0.974
RYR1
Ryanodine receptor 1.
   
 0.971
ENSCWAP00000019891
annotation not available
   
 0.970
CACNB3
Calcium voltage-gated channel auxiliary subunit beta 3.
   
 0.970
CACNA2D2
Calcium voltage-gated channel auxiliary subunit alpha2delta 2.
   
 0.970
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.