STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDKL3Cyclin dependent kinase like 3. (587 aa)    
Predicted Functional Partners:
ANKRD10
Ankyrin repeat domain 10.
    
 
 0.753
TMEM17
Transmembrane protein 17.
      
 0.693
PMS1
PMS1 homolog 1, mismatch repair system component.
      
 0.616
CEP19
Centrosomal protein 19.
      
 0.599
FUT8
Fucosyltransferase 8.
   
  
 0.597
ENSCWAP00000019827
annotation not available
      
 0.594
ENSCWAP00000020066
annotation not available
      
 0.594
SPHKAP
SPHK1 interactor, AKAP domain containing.
   
  
 0.590
TMEM231
Transmembrane protein 231.
      
 0.585
SNX25
Sorting nexin 25.
      
 0.585
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.