STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDKL3Cyclin dependent kinase like 3. (587 aa)    
Predicted Functional Partners:
ANKRD10
Ankyrin repeat domain 10.
      
 0.785
CEP19
Centrosomal protein 19.
      
 0.746
TMEM17
Transmembrane protein 17.
      
 0.745
PMS1
PMS1 homolog 1, mismatch repair system component.
      
 0.740
BVES
Blood vessel epicardial substance.
      
 0.719
SNX25
Sorting nexin 25.
      
 0.690
TMEM231
Transmembrane protein 231.
      
 0.685
ENSCWAP00000019827
annotation not available
      
 0.685
ENSCWAP00000020066
annotation not available
      
 0.685
MOGAT1
Monoacylglycerol O-acyltransferase 1.
      
 0.678
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.