Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYO7AMyosin VIIA. (2216 aa)    
Predicted Functional Partners:
WHRN
Whirlin.
    
 0.984
USH1C
USH1 protein network component harmonin.
   
 0.957
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.953
USH1G
USH1 protein network component sans.
   
 0.912
ATOH1
Atonal bHLH transcription factor 1.
      
 0.844
RDX
Radixin.
    
 0.824
CDH23
Cadherin related 23.
    
 0.813
ALKBH5
alkB homolog 5, RNA demethylase.
     
  0.809
ESPN
Espin.
    
 0.795
CTBP2
C-terminal binding protein 2.
      
 0.793
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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