Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NKRFNFKB repressing factor. (705 aa)    
Predicted Functional Partners:
STAU1
Staufen double-stranded RNA binding protein 1.
    
   0.946
DHX15
DEAH-box helicase 15.
    
 
 0.946
PRKRA
Protein activator of interferon induced protein kinase EIF2AK2.
    
   0.930
ANLN
Anillin actin binding protein.
    
 
 0.890
XRN2
5'-3' exoribonuclease 2.
   
 
 0.862
NPM1
Nucleophosmin 1.
    
   0.846
STAU2
Staufen double-stranded RNA binding protein 2.
    
   0.820
RPL3
Ribosomal protein L3.
    
   0.804
TARBP2
TARBP2 subunit of RISC loading complex.
    
   0.800
ADARB1
Adenosine deaminase RNA specific B1.
    
   0.796
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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