Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPNMBGlycoprotein nmb. (565 aa)    
Predicted Functional Partners:
TYRP1
Tyrosinase related protein 1.
      
 0.864
HBEGF
Heparin binding EGF like growth factor.
     
 0.838
TREM2
Triggering receptor expressed on myeloid cells 2.
   
  
 0.782
CLEC7A
C-type lectin domain containing 7A.
      
 0.781
LGALS3
Galectin 3.
   
  
 0.770
EGFR
Epidermal growth factor receptor.
    
 0.737
TYROBP
TYRO protein tyrosine kinase binding protein.
   
  
 0.717
CX3CR1
C-X3-C motif chemokine receptor 1.
      
 0.711
APOE
Apolipoprotein E.
   
  
 0.687
BPIFB4
BPI fold containing family B member 4.
   
  
 0.681
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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