STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPNMBGlycoprotein nmb. (565 aa)    
Predicted Functional Partners:
EGFR
Epidermal growth factor receptor.
    
 0.804
TYRP1
Tyrosinase related protein 1.
      
 0.789
CLEC7A
C-type lectin domain containing 7A.
      
 0.766
TREM2
Triggering receptor expressed on myeloid cells 2.
   
  
 0.758
PAX5
Paired box 5.
      
 0.741
HBEGF
Heparin binding EGF like growth factor.
     
 0.733
LGALS3
Galectin 3.
   
  
 0.731
VWF
Von Willebrand factor.
      
 0.684
TYROBP
TYRO protein tyrosine kinase binding protein.
   
  
 0.681
TFEC
Transcription factor EC.
      
 0.673
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.