STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGSF6Immunoglobulin superfamily member 6. (238 aa)    
Predicted Functional Partners:
METTL9
Methyltransferase like 9.
      
 0.823
TBXAS1
Thromboxane A synthase 1.
   
  
 0.625
IGSF11
Immunoglobulin superfamily member 11.
  
   
 0.608
ENSCWAP00000011613
annotation not available
   
  
 0.595
KNOP1
Lysine rich nucleolar protein 1.
      
 0.589
WDR38
WD repeat domain 38.
      
 0.589
ADGRE3
Adhesion G protein-coupled receptor E3.
   
  
 0.588
MFSD4B
Major facilitator superfamily domain containing 4B.
      
 0.588
FRY
FRY microtubule binding protein.
      
 0.587
ZDHHC22
Zinc finger DHHC-type containing 22.
      
 0.558
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.