STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGSF6Immunoglobulin superfamily member 6. (238 aa)    
Predicted Functional Partners:
ENSCWAP00000026276
annotation not available
   
  
 0.674
MFSD4B
Major facilitator superfamily domain containing 4B.
      
 0.652
KNOP1
Lysine rich nucleolar protein 1.
      
 0.650
WDR38
WD repeat domain 38.
      
 0.650
FRY
FRY microtubule binding protein.
      
 0.634
ENSCWAP00000011613
annotation not available
   
  
 0.623
CSRNP1
Cysteine and serine rich nuclear protein 1.
      
 0.569
ENSCWAP00000005881
annotation not available
      
 0.562
FAM133B
Family with sequence similarity 133 member B.
      
 0.542
FAM133A
Family with sequence similarity 133 member A.
      
 0.542
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.