STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM36Tripartite motif containing 36. (728 aa)    
Predicted Functional Partners:
CUL9
Cullin 9.
    
 
 0.757
HERC2
HECT and RLD domain containing E3 ubiquitin protein ligase 2.
      
 0.745
CUL7
Cullin 7.
    
 
 0.739
RCOR1
REST corepressor 1.
    
 
 0.713
KIF3B
Kinesin family member 3B.
    
 
 0.707
NEK5
NIMA related kinase 5.
    
 
 0.671
TMEM63A
Transmembrane protein 63A.
      
 0.658
ANO4
Anoctamin 4.
      
 0.651
ANKRD9
Ankyrin repeat domain 9.
    
 
 0.649
TRIM39
Tripartite motif containing 39.
      
 0.649
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.