STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RTN4RL1Reticulon 4 receptor like 1. (445 aa)    
Predicted Functional Partners:
SMYD4
SET and MYND domain containing 4.
    
 
 0.697
TSR3
TSR3 ribosome maturation factor.
      
 0.693
RTN4
Reticulon 4.
    
 0.676
NTNG1
Netrin G1.
    
 0.589
CNTN4
Contactin 4.
    
 
 0.584
ENSCWAP00000015224
annotation not available
      
 0.562
TONSL
Tonsoku like, DNA repair protein.
    
  0.544
CASK
Calcium/calmodulin dependent serine protein kinase.
    
  0.529
EEF1G
Eukaryotic translation elongation factor 1 gamma.
    
 0.523
FRAS1
Fraser extracellular matrix complex subunit 1.
    
 0.515
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.