LCN10 protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LCN10

Lipocalin 10. (204 aa)

Predicted Functional Partners:

ENSCWAP00000001617

0.802

ENSCWAP00000016589

0.751

CDC73

0.718

LCN8

0.706

CINP

0.700

CTR9

0.700

PAF1

0.699

TMEM141

0.692

APOD

0.677

FAM174B

0.652

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

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... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APOD	ENSCWAP00000001617	ENSCWAP00000018652	ENSCWAP00000001617	Apolipoprotein D.	annotation not available	0.497
APOD	ENSCWAP00000016589	ENSCWAP00000018652	ENSCWAP00000016589	Apolipoprotein D.	annotation not available	0.800
APOD	LCN10	ENSCWAP00000018652	ENSCWAP00000001597	Apolipoprotein D.	Lipocalin 10.	0.677
APOD	LCN8	ENSCWAP00000018652	ENSCWAP00000001685	Apolipoprotein D.	Lipocalin 8.	0.539
CDC73	CINP	ENSCWAP00000014023	ENSCWAP00000008273	Cell division cycle 73.	Cyclin dependent kinase 2 interacting protein.	0.990
CDC73	CTR9	ENSCWAP00000014023	ENSCWAP00000018685	Cell division cycle 73.	CTR9 homolog, Paf1/RNA polymerase II complex component.	0.999
CDC73	ENSCWAP00000001617	ENSCWAP00000014023	ENSCWAP00000001617	Cell division cycle 73.	annotation not available	0.718
CDC73	LCN10	ENSCWAP00000014023	ENSCWAP00000001597	Cell division cycle 73.	Lipocalin 10.	0.718
CDC73	PAF1	ENSCWAP00000014023	ENSCWAP00000020947	Cell division cycle 73.	PAF1 homolog, Paf1/RNA polymerase II complex component.	0.999
CINP	CDC73	ENSCWAP00000008273	ENSCWAP00000014023	Cyclin dependent kinase 2 interacting protein.	Cell division cycle 73.	0.990
CINP	ENSCWAP00000001617	ENSCWAP00000008273	ENSCWAP00000001617	Cyclin dependent kinase 2 interacting protein.	annotation not available	0.700
CINP	LCN10	ENSCWAP00000008273	ENSCWAP00000001597	Cyclin dependent kinase 2 interacting protein.	Lipocalin 10.	0.700
CINP	PAF1	ENSCWAP00000008273	ENSCWAP00000020947	Cyclin dependent kinase 2 interacting protein.	PAF1 homolog, Paf1/RNA polymerase II complex component.	0.991
CTR9	CDC73	ENSCWAP00000018685	ENSCWAP00000014023	CTR9 homolog, Paf1/RNA polymerase II complex component.	Cell division cycle 73.	0.999
CTR9	ENSCWAP00000001617	ENSCWAP00000018685	ENSCWAP00000001617	CTR9 homolog, Paf1/RNA polymerase II complex component.	annotation not available	0.700
CTR9	LCN10	ENSCWAP00000018685	ENSCWAP00000001597	CTR9 homolog, Paf1/RNA polymerase II complex component.	Lipocalin 10.	0.700
CTR9	PAF1	ENSCWAP00000018685	ENSCWAP00000020947	CTR9 homolog, Paf1/RNA polymerase II complex component.	PAF1 homolog, Paf1/RNA polymerase II complex component.	0.999
ENSCWAP00000001617	APOD	ENSCWAP00000001617	ENSCWAP00000018652	annotation not available	Apolipoprotein D.	0.497
ENSCWAP00000001617	CDC73	ENSCWAP00000001617	ENSCWAP00000014023	annotation not available	Cell division cycle 73.	0.718
ENSCWAP00000001617	CINP	ENSCWAP00000001617	ENSCWAP00000008273	annotation not available	Cyclin dependent kinase 2 interacting protein.	0.700