STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUP42Nucleoporin 42. (418 aa)    
Predicted Functional Partners:
NUP98
Nucleoporin 98.
    
 0.995
NUP88
Nucleoporin 88.
    
 0.994
AAAS
Aladin WD repeat nucleoporin.
    
 0.994
GLE1
GLE1 RNA export mediator.
    
 0.993
NUP214
Nucleoporin 214.
    
 0.992
NUP93
Nucleoporin 93.
    
 0.989
RANBP2
RAN binding protein 2.
    
 0.988
NUP35
Nucleoporin 35.
    
 0.984
RAE1
Ribonucleic acid export 1.
    
 0.976
NUP50
Nucleoporin 50.
     
 0.967
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.