STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP42Nucleoporin 42. (418 aa)    
Predicted Functional Partners:
GLE1
GLE1 RNA export mediator.
    
 0.991
NUP214
Nucleoporin 214.
    
 0.989
NUP88
Nucleoporin 88.
     
 0.986
RAE1
Ribonucleic acid export 1.
    
 0.985
NUP98
Nucleoporin 98.
     
 0.982
AAAS
Aladin WD repeat nucleoporin.
    
 0.980
NUP35
Nucleoporin 35.
    
 0.974
NUP153
Nucleoporin 153.
    
 0.974
NUP188
Nucleoporin 188.
     
 0.962
NUP50
Nucleoporin 50.
     
 0.961
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.