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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBMS1RNA binding motif single stranded interacting protein 1. (406 aa)    
Predicted Functional Partners:
CCPG1
Cell cycle progression 1.
    
 
 0.643
SNTB1
Syntrophin beta 1.
      
 0.609
ADGRL3
Adhesion G protein-coupled receptor L3.
      
 0.607
OSTF1
Osteoclast stimulating factor 1.
      
 0.551
LSM11
LSM11, U7 small nuclear RNA associated.
      
 0.527
FOXL2
Forkhead box L2.
      
 0.527
MAP3K5
Mitogen-activated protein kinase kinase kinase 5.
      
 0.520
BTG1
BTG anti-proliferation factor 1.
      
 0.491
NAPA
NSF attachment protein alpha.
      
 0.478
PDS5A
PDS5 cohesin associated factor A.
      
 0.459
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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