STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VOPP1VOPP1 WW domain binding protein. (160 aa)    
Predicted Functional Partners:
WWOX
WW domain containing oxidoreductase.
    
 
 0.835
CYYR1
Cysteine and tyrosine rich 1.
      
 0.786
TMEM207
Transmembrane protein 207.
      
 0.752
ENSCWAP00000004791
annotation not available
      
 0.696
C7orf25
Chromosome 7 open reading frame 25.
      
 0.649
SHISA3
Shisa family member 3.
      
 0.647
ENSCWAP00000006276
annotation not available
      
 0.584
SEC61G
SEC61 translocon gamma subunit.
      
 0.584
SHISAL1
Shisa like 1.
      
 0.584
PSMA2
Proteasome 20S subunit alpha 2.
      
 0.579
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.