STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2Q1Ubiquitin conjugating enzyme E2 Q1. (422 aa)    
Predicted Functional Partners:
UBE2Q2
Ubiquitin conjugating enzyme E2 Q2.
     
  0.890
UBE2QL1
Ubiquitin conjugating enzyme E2 Q family like 1.
     
 0.841
TMEM231
Transmembrane protein 231.
     
  0.803
UBA1
Ubiquitin like modifier activating enzyme 1.
   
 0.774
UBA7
Ubiquitin like modifier activating enzyme 7.
   
 0.774
UBE2H
Ubiquitin conjugating enzyme E2 H.
   
 
 0.769
UBA6
Ubiquitin like modifier activating enzyme 6.
   
 0.752
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
     
 0.713
UBE2T
Ubiquitin conjugating enzyme E2 T.
     
 0.710
UBA3
Ubiquitin like modifier activating enzyme 3.
    
 0.703
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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