STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA1Replication protein A1. (616 aa)    
Predicted Functional Partners:
RPA3
Replication protein A3.
   
 0.999
BLM
BLM RecQ like helicase.
   
 0.997
TOP3A
DNA topoisomerase III alpha.
    
 0.995
PCNA
Proliferating cell nuclear antigen.
   
 0.995
RPA2
Replication protein A2.
   
 0.995
RMI1
RecQ mediated genome instability 1.
    
 0.994
RAD51
RAD51 recombinase.
  
 0.994
ATRIP
ATR interacting protein.
    
 0.992
XPA
XPA, DNA damage recognition and repair factor.
    
 0.992
POLD1
DNA polymerase delta 1, catalytic subunit.
   
 0.991
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.