STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PELOPelota mRNA surveillance and ribosome rescue factor. (385 aa)    
Predicted Functional Partners:
HBS1L
HBS1 like translational GTPase.
   
 0.999
ENSCWAP00000011123
annotation not available
    
 
 0.999
ENSCWAP00000018117
annotation not available
    
 
 0.999
ABCE1
ATP binding cassette subfamily E member 1.
  
 
 0.978
RPS3
Ribosomal protein S3.
   
 
 0.948
ENSCWAP00000016290
annotation not available
    
 
 0.946
RPL19
Ribosomal protein L19.
   
 
 0.940
ENSCWAP00000010981
annotation not available
    
 
 0.939
ENSCWAP00000013956
annotation not available
   
   0.931
RPS19
Ribosomal protein S19.
    
 
 0.930
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.