STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMYD4SET and MYND domain containing 4. (808 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
   
 0.868
SMYD5
SMYD family member 5.
      
0.865
SMYD3
SET and MYND domain containing 3.
   
 
0.808
SMYD1
SET and MYND domain containing 1.
   
 
0.807
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
    
 0.807
ROGDI
Rogdi atypical leucine zipper.
      
 0.801
DOT1L
DOT1 like histone lysine methyltransferase.
    
 0.794
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.793
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.791
EED
Embryonic ectoderm development.
    
 0.790
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.