STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMYD4SET and MYND domain containing 4. (808 aa)    
Predicted Functional Partners:
SMYD5
SMYD family member 5.
      
 0.835
PRDM4
PR/SET domain 4.
   
 0.796
TP53
Tumor protein p53.
    
 0.782
SETD2
SET domain containing 2, histone lysine methyltransferase.
     
 0.762
ENSCWAP00000005887
annotation not available
    
 0.758
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
    
 0.758
KDM6B
Lysine demethylase 6B.
    
 0.751
KDM6A
Lysine demethylase 6A.
    
 0.751
MTMR14
Myotubularin related protein 14.
     
 0.739
KMT2E
Lysine methyltransferase 2E.
    
 0.726
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.