Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A30Solute carrier family 25 member 30. (291 aa)    
Predicted Functional Partners:
SCAMP2
Secretory carrier membrane protein 2.
      
 0.697
PIPOX
Pipecolic acid and sarcosine oxidase.
      
 0.638
TMLHE
Trimethyllysine hydroxylase, epsilon.
      
 0.589
SNIP1
Smad nuclear interacting protein 1.
      
 0.588
PLPP1
Phospholipid phosphatase 1.
      
 0.587
ALG8
ALG8 alpha-1,3-glucosyltransferase.
      
 0.585
SPRY3
Sprouty RTK signaling antagonist 3.
      
 0.585
LGALS2
Galectin 2.
      
 0.584
CHMP5
Charged multivesicular body protein 5.
      
 0.584
TMEM115
Transmembrane protein 115.
      
 0.580
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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