STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001662annotation not available (497 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.949
ENSCWAP00000007138
annotation not available
    
 0.925
NBR1
NBR1 autophagy cargo receptor.
   
 0.924
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 0.922
RPL19
Ribosomal protein L19.
   
 0.905
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.904
TRAF7
TNF receptor associated factor 7.
    
 0.901
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.899
RPL23A
Ribosomal protein L23a.
   
 0.898
RPS21
Ribosomal protein S21.
   
  0.895
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.