STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX41DEAD-box helicase 41. (622 aa)    
Predicted Functional Partners:
STING1
Stimulator of interferon response cGAMP interactor 1.
    
 0.989
CDC40
Cell division cycle 40.
    
 0.987
SLU7
SLU7 homolog, splicing factor.
    
  0.986
PPIL1
Peptidylprolyl isomerase like 1.
    
 0.981
SYF2
SYF2 pre-mRNA splicing factor.
    
  0.979
ENSCWAP00000025734
annotation not available
   
 0.972
CACTIN
Cactin, spliceosome C complex subunit.
    
 0.970
TRIM21
Tripartite motif containing 21.
    
 0.962
C9orf78
Chromosome 9 open reading frame 78.
    
  0.962
NKAP
NFKB activating protein.
    
 0.954
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.