STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX41DEAD-box helicase 41. (622 aa)    
Predicted Functional Partners:
TRIM21
Tripartite motif containing 21.
    
 0.984
CDC40
Cell division cycle 40.
    
 0.955
SRRM1
Serine and arginine repetitive matrix 1.
    
  0.953
ALYREF
Aly/REF export factor.
   
  0.953
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
     
 0.935
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.924
DHX36
DEAH-box helicase 36.
    
 0.842
DHX9
DExH-box helicase 9.
    
 0.838
NKAP
NFKB activating protein.
    
  0.836
NKAPL
NFKB activating protein like.
    
  0.836
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.