STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001665annotation not available (188 aa)    
Predicted Functional Partners:
MIF4GD
MIF4G domain containing.
    
 
 0.959
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.952
ERI1
Exoribonuclease 1.
    
 
 0.927
UPF1
UPF1 RNA helicase and ATPase.
    
 
 0.898
LSM11
LSM11, U7 small nuclear RNA associated.
     
 0.874
LSM10
LSM10, U7 small nuclear RNA associated.
   
 
 0.833
CTIF
Cap binding complex dependent translation initiation factor.
    
 
 0.815
EIF4E
Eukaryotic translation initiation factor 4E.
   
 
 0.810
PCNA
Proliferating cell nuclear antigen.
   
  
 0.805
CCNF
Cyclin F.
   
 
 0.795
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.