STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CWC25CWC25 spliceosome associated protein homolog. (425 aa)    
Predicted Functional Partners:
DHX38
DEAH-box helicase 38.
    
 0.999
CDC40
Cell division cycle 40.
    
 0.999
YJU2
YJU2 splicing factor homolog.
   
 0.999
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.998
PRPF8
pre-mRNA processing factor 8.
    
 0.997
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.997
SYF2
SYF2 pre-mRNA splicing factor.
   
 0.997
SRRM2
Serine/arginine repetitive matrix 2.
   
 0.997
PRPF19
pre-mRNA processing factor 19.
    
 0.996
ENSCWAP00000025112
annotation not available
   
 0.995
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.