Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001669annotation not available (254 aa)    
Predicted Functional Partners:
CDC73
Cell division cycle 73.
   
 0.703
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.682
CINP
Cyclin dependent kinase 2 interacting protein.
    
 0.667
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.667
APOD
Apolipoprotein D.
     
 0.617
LCN2
Lipocalin 2.
      
 0.608
HPGDS
Hematopoietic prostaglandin D synthase.
     
 0.594
ENSCWAP00000016589
annotation not available
   
 
 0.564
CDYL2
Chromodomain Y like 2.
    
 
 0.530
CDYL
Chromodomain Y like.
    
 
 0.530
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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