STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSKUTsukushi, small leucine rich proteoglycan. (359 aa)    
Predicted Functional Partners:
ENSCWAP00000025112
annotation not available
    
 
 0.712
P2RY2
Purinergic receptor P2Y2.
  
   
 0.701
TBRG1
Transforming growth factor beta regulator 1.
      
 0.669
STOML1
Stomatin like 1.
   
  
 0.626
HSPA13
Heat shock protein family A (Hsp70) member 13.
    
 
 0.611
GDPD5
Glycerophosphodiester phosphodiesterase domain containing 5.
      
 0.597
ZSCAN2
Zinc finger and SCAN domain containing 2.
    
 
 0.592
FZD4
Frizzled class receptor 4.
    
 
 0.591
RHOD
Ras homolog family member D.
    
 0.591
EPDR1
Ependymin related 1.
      
 0.586
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.