STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINF1Serpin family F member 1. (416 aa)    
Predicted Functional Partners:
EPM2AIP1
EPM2A interacting protein 1.
    
   0.945
LRP5
LDL receptor related protein 5.
    
 0.939
LRP6
LDL receptor related protein 6.
    
 0.914
PDK4
Pyruvate dehydrogenase kinase 4.
      
 0.881
ENSCWAP00000009997
annotation not available
    
   0.879
PLAT
Plasminogen activator, tissue type.
    
 0.838
F2
Coagulation factor II, thrombin.
   
 0.826
SERPINC1
Serpin family C member 1.
  
0.809
PLAU
Plasminogen activator, urokinase.
    
 0.789
PLG
Plasminogen.
   
 0.788
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.