STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISL1ISL LIM homeobox 1. (349 aa)    
Predicted Functional Partners:
LHX3
LIM homeobox 3.
    
0.952
LDB1
LIM domain binding 1.
    
 0.948
LHX4
LIM homeobox 4.
    
0.909
LDB2
LIM domain binding 2.
    
 0.900
PTF1A
Pancreas associated transcription factor 1a.
   
 0.812
GATA4
GATA binding protein 4.
    
 0.760
HAND2
Heart and neural crest derivatives expressed 2.
    
 0.759
POU4F1
POU class 4 homeobox 1.
    
 
 0.755
PAX6
Paired box 6.
   
 
 0.736
GATA3
GATA binding protein 3.
   
 0.732
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.