STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KCNMB1Potassium calcium-activated channel subfamily M regulatory beta subunit 1. (129 aa)    
Predicted Functional Partners:
KCNU1
Potassium calcium-activated channel subfamily U member 1.
    
 0.988
KCNMA1
Potassium calcium-activated channel subfamily M alpha 1.
    
 0.988
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
     
 0.955
KCNN1
Potassium calcium-activated channel subfamily N member 1.
     
 0.933
KCNN2
Potassium calcium-activated channel subfamily N member 2.
     
 0.924
KCNN4
Potassium calcium-activated channel subfamily N member 4.
     
 0.915
KCNN3
Potassium calcium-activated channel subfamily N member 3.
     
 0.904
CACNA1F
Calcium voltage-gated channel subunit alpha1 F.
     
 0.903
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
     
 0.902
PRKACA
Protein kinase cAMP-activated catalytic subunit alpha.
     
 0.902
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.