STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCN15Lipocalin 15. (184 aa)    
Predicted Functional Partners:
CDC73
Cell division cycle 73.
    
 0.718
LCN1
Lipocalin 1.
     
 0.703
CINP
Cyclin dependent kinase 2 interacting protein.
    
 0.700
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.700
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.699
FOLH1
Folate hydrolase 1.
      
 0.681
ENSCWAP00000020370
annotation not available
   
 
0.674
ENSCWAP00000016589
annotation not available
     
0.643
C8B
Complement C8 beta chain.
   
 0.638
FYB1
FYN binding protein 1.
   
 0.626
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.