STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LCN15Lipocalin 15. (184 aa)    
Predicted Functional Partners:
ALKBH2
alkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
    
   0.837
NUDT15
Nudix hydrolase 15.
    
   0.812
ATG4A
Autophagy related 4A cysteine peptidase.
    
   0.794
ENSCWAP00000016589
annotation not available
     
 0.769
CDC73
Cell division cycle 73.
   
 0.703
APOD
Apolipoprotein D.
     
 0.701
ENSCWAP00000020370
annotation not available
   
 
 0.693
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.682
LCN10
Lipocalin 10.
      
 0.677
CINP
Cyclin dependent kinase 2 interacting protein.
    
 0.667
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.