STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKP1Plakophilin 1. (727 aa)    
Predicted Functional Partners:
PKP3
Plakophilin 3.
  
 
0.956
CASP3
Caspase 3.
    
  0.943
JUP
Junction plakoglobin.
   
 0.934
ENSCWAP00000027361
annotation not available
    
 0.911
DSG1
Desmoglein 1.
   
 0.905
FMR1
FMRP translational regulator 1.
    
 0.896
DSG2
Desmoglein 2.
   
 0.895
DSG3
Desmoglein 3.
   
 0.895
ARVCF
ARVCF delta catenin family member.
     
0.887
PERP
P53 apoptosis effector related to PMP22.
   
 
 0.861
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.