STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKP1Plakophilin 1. (727 aa)    
Predicted Functional Partners:
DSG1
Desmoglein 1.
   
 0.998
DSG2
Desmoglein 2.
   
 0.988
DSG3
Desmoglein 3.
   
 0.987
JUP
Junction plakoglobin.
   
 0.974
DSC1
Desmocollin 1.
   
 0.953
DSC2
Desmocollin 2.
   
 0.953
MACF1
Microtubule actin crosslinking factor 1.
   
 0.952
DST
Dystonin.
   
 0.952
DSC3
Desmocollin 3.
   
 0.949
DSG4
Desmoglein 4.
   
 0.926
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.