STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001723annotation not available (343 aa)    
Predicted Functional Partners:
CWC27
CWC27 spliceosome associated cyclophilin.
    
 0.992
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.991
DHX16
DEAH-box helicase 16.
    
 0.988
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 0.982
SF3B2
Splicing factor 3b subunit 2.
    
 0.981
IK
IK cytokine.
    
  0.980
CDC40
Cell division cycle 40.
    
 0.972
SF3B1
Splicing factor 3b subunit 1.
    
 0.957
GPKOW
G-patch domain and KOW motifs.
   
  0.957
BUD13
BUD13 homolog.
    
 0.956
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.