Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC112Coiled-coil domain containing 112. (528 aa)    
Predicted Functional Partners:
TEX9
Testis expressed 9.
    
 
 0.952
PGGT1B
Protein geranylgeranyltransferase type I subunit beta.
 
    
 0.606
TEX29
Testis expressed 29.
      
 0.581
NEXMIF
Neurite extension and migration factor.
      
 0.579
ESYT1
Extended synaptotagmin 1.
    
 
 0.578
FEM1B
Fem-1 homolog B.
   
 
 0.559
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.553
ST8SIA4
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4.
      
 0.548
TNN
Tenascin N.
    
 0.541
TNR
Tenascin R.
    
 0.541
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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