STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LASP1LIM and SH3 protein 1. (243 aa)    
Predicted Functional Partners:
EZR
Ezrin.
   
 
 0.829
ZYX
Zyxin.
    
 
 0.824
LPP
LIM domain containing preferred translocation partner in lipoma.
    
 
 0.799
ZFAT
Zinc finger and AT-hook domain containing.
    
 
 0.782
PALLD
Palladin, cytoskeletal associated protein.
    
 
 0.775
VASP
Vasodilator stimulated phosphoprotein.
   
 
 0.770
NCAPG
non-SMC condensin I complex subunit G.
      
 0.670
TMOD1
Tropomodulin 1.
   
 0.663
TMOD4
Tropomodulin 4.
   
 0.650
MYO18A
Myosin XVIIIA.
   
 0.648
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.