STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM87ATransmembrane protein 87A. (558 aa)    
Predicted Functional Partners:
SMIM7
Small integral membrane protein 7.
      
 0.808
CCDC186
Coiled-coil domain containing 186.
   
  
 0.794
CASC4
Cancer susceptibility 4.
      
 0.776
TM9SF3
Transmembrane 9 superfamily member 3.
      
 0.754
TMEM120A
Transmembrane protein 120A.
      
 0.754
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
      
 0.743
TMEM63C
Transmembrane protein 63C.
      
 0.685
RAB30
RAB30, member RAS oncogene family.
      
 0.679
TMEM63B
Transmembrane protein 63B.
      
 0.660
TMEM63A
Transmembrane protein 63A.
      
 0.613
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.