STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AUHAU RNA binding methylglutaconyl-CoA hydratase. (338 aa)    
Predicted Functional Partners:
HADH
hydroxyacyl-CoA dehydrogenase.
 0.960
MCCC2
methylcrotonoyl-CoA carboxylase 2.
  
 
 0.933
HMGCLL1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1.
  
 
 0.933
MCCC1
methylcrotonoyl-CoA carboxylase 1.
  
 0.931
HMGCS1
3-hydroxy-3-methylglutaryl-CoA synthase 1.
  
 
 0.911
HMGCS2
3-hydroxy-3-methylglutaryl-CoA synthase 2.
  
 
 0.911
ENSCWAP00000020844
annotation not available
  
 
 0.906
ENSCWAP00000025895
annotation not available
  
 
 0.906
PCCA
propionyl-CoA carboxylase subunit alpha.
  
 0.889
SCP2
Sterol carrier protein 2.
  
 0.864
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.