PDLIM7 protein (Catagonus wagneri) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

PDLIM7

PDZ and LIM domain 7. (458 aa)

Predicted Functional Partners:

EHBP1

0.873

EHBP1L1

0.864

PDLIM1

0.862

PDLIM5

0.858

PDLIM3

0.839

PDLIM4

0.825

ENSCWAP00000020712

0.825

SMTN

0.824

SMTNL2

0.817

MYO6

0.811

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EHBP1	EHBP1L1	ENSCWAP00000019025	ENSCWAP00000014856	EH domain binding protein 1.	EH domain binding protein 1 like 1.	0.815
EHBP1	ENSCWAP00000020712	ENSCWAP00000019025	ENSCWAP00000020712	EH domain binding protein 1.	annotation not available	0.923
EHBP1	MYO6	ENSCWAP00000019025	ENSCWAP00000021427	EH domain binding protein 1.	Myosin VI.	0.762
EHBP1	PDLIM1	ENSCWAP00000019025	ENSCWAP00000024383	EH domain binding protein 1.	PDZ and LIM domain 1.	0.923
EHBP1	PDLIM3	ENSCWAP00000019025	ENSCWAP00000004330	EH domain binding protein 1.	PDZ and LIM domain 3.	0.923
EHBP1	PDLIM4	ENSCWAP00000019025	ENSCWAP00000000137	EH domain binding protein 1.	PDZ and LIM domain 4.	0.923
EHBP1	PDLIM5	ENSCWAP00000019025	ENSCWAP00000020105	EH domain binding protein 1.	PDZ and LIM domain 5.	0.924
EHBP1	PDLIM7	ENSCWAP00000019025	ENSCWAP00000001749	EH domain binding protein 1.	PDZ and LIM domain 7.	0.873
EHBP1	SMTN	ENSCWAP00000019025	ENSCWAP00000013786	EH domain binding protein 1.	Smoothelin.	0.893
EHBP1	SMTNL2	ENSCWAP00000019025	ENSCWAP00000028929	EH domain binding protein 1.	Smoothelin like 2.	0.893
EHBP1L1	EHBP1	ENSCWAP00000014856	ENSCWAP00000019025	EH domain binding protein 1 like 1.	EH domain binding protein 1.	0.815
EHBP1L1	ENSCWAP00000020712	ENSCWAP00000014856	ENSCWAP00000020712	EH domain binding protein 1 like 1.	annotation not available	0.870
EHBP1L1	MYO6	ENSCWAP00000014856	ENSCWAP00000021427	EH domain binding protein 1 like 1.	Myosin VI.	0.693
EHBP1L1	PDLIM1	ENSCWAP00000014856	ENSCWAP00000024383	EH domain binding protein 1 like 1.	PDZ and LIM domain 1.	0.871
EHBP1L1	PDLIM3	ENSCWAP00000014856	ENSCWAP00000004330	EH domain binding protein 1 like 1.	PDZ and LIM domain 3.	0.852
EHBP1L1	PDLIM4	ENSCWAP00000014856	ENSCWAP00000000137	EH domain binding protein 1 like 1.	PDZ and LIM domain 4.	0.870
EHBP1L1	PDLIM5	ENSCWAP00000014856	ENSCWAP00000020105	EH domain binding protein 1 like 1.	PDZ and LIM domain 5.	0.870
EHBP1L1	PDLIM7	ENSCWAP00000014856	ENSCWAP00000001749	EH domain binding protein 1 like 1.	PDZ and LIM domain 7.	0.864
EHBP1L1	SMTN	ENSCWAP00000014856	ENSCWAP00000013786	EH domain binding protein 1 like 1.	Smoothelin.	0.801
EHBP1L1	SMTNL2	ENSCWAP00000014856	ENSCWAP00000028929	EH domain binding protein 1 like 1.	Smoothelin like 2.	0.791